BridgeDb integrations

Connect BridgeDb to any other app, or use it from your AI client over MCP. bridgedb webservices

No account neededbridgedb.org

6 actions

What the catalog holds today. Ask for anything missing and your agent reads the API documentation and adds it.

Build solutions, not workarounds.

What do you want to automate with BridgeDb?

Ask the assistant

Connect your AI client

Give your AI client this address.

https://mcp.apiant.ai

One connection does both: ask your client to act in an app once, or have it build an automation that keeps running. Any client that takes a remote MCP server. Nothing to install. Create your free account, then sign in once in your browser.

Set it up in your client

Claude Code

Run this in the directory you want to work in.

claude mcp add --transport http -s project apiant-ai https://mcp.apiant.ai

Start Claude Code there, approve the server, and sign in in the browser page it opens.

Claude Code guide

Claude, web and desktop

Open Customize, then Connectors, then Add custom connector, and paste the address. On Team and Enterprise an owner adds it first.

Setup guide

Cursor

Add the address to your MCP configuration as a server URL. Cursor signs you in in your browser.

Setup guide

Zed

Open Settings, then AI, then MCP Servers, then Add Server, then Add Remote Server.

Setup guide

Codex and the ChatGPT desktop app

Open Settings, then MCP servers, then Add server, and choose Streamable HTTP. From the terminal, Codex takes the address with its own add command and then signs you in.

Setup guide

Any other MCP client

Paste the address where the client asks for a remote MCP server URL, and name the server apiant-ai where it lets you. APIANT's skills reach the client over the same connection.

Setup guide

Popular

BridgeDb with the apps people pair it with most

Pair it

Connect BridgeDb with another app

What your agent can do with BridgeDb

Triggers and actions 6 actions

Action
Batch find equivalent identifiers
Map many identifiers at once (newline-delimited, optional per-line source system code and optional target system code) to their equivalents, for a given organism.
Action
Find equivalent identifier in target database
Map a source identifier to its equivalent identifier(s) in one specified target data source, for a given organism.
Action
Find equivalent identifiers
Map a source identifier to all equivalent identifiers across every other data source, for a given organism.
Action
Find identifiers by name
Free-text search for identifiers matching a query string within an organism, optionally capped to a result limit.
Action
List data sources
List the full BridgeDb data-source registry (system code, canonical name, identifier pattern, type) bundled with the deployment. Not organism-scoped.
Action
List organisms
List the organisms loaded in this BridgeDb deployment, which are the valid values for the {organism} path segment used by every other operation.

Related apps

What our customers say

Questions

BridgeDb, answered

Is there a BridgeDb MCP server?

APIANT's MCP server at https://mcp.apiant.ai works with BridgeDb. Add that address to any AI client that takes a remote MCP server and sign in once in your browser. Your client can then run BridgeDb actions on demand, or have APIANT build, test and run automations that use BridgeDb. Nothing to install.

What can your agent do in BridgeDb?

Any of BridgeDb's 6 actions, including Batch find equivalent identifiers, Find equivalent identifier in target database, Find equivalent identifiers and Find identifiers by name. Your agent maps the data both ways and tests every scenario before it ships.

Can I use BridgeDb directly from Claude, ChatGPT or Cursor?

Yes. Connect your AI client to APIANT once and it works with BridgeDb two ways. Ask it to do something in BridgeDb once and it runs that action on the spot. Ask for an automation and your agent builds it, tests every scenario and keeps it running on its own. A one-off action uses your plan's tasks the same way an automation step does.

Do I need to write code against the BridgeDb API?

No. APIANT connects to the BridgeDb API for you. Describe what you want in plain language and your agent builds it on the BridgeDb triggers and actions in the catalog. If you need an endpoint that is not there yet, your agent reads the BridgeDb API documentation and adds it.

Which apps can BridgeDb connect to?

Any app in the catalog; the list on this page pairs BridgeDb with each of them. If the other app is missing, point your agent at its API documentation and it builds the connector.

What happens when something fails?

Your agent works that out for you. It plans the failure paths along with the happy path, then tests every scenario before it ships.

Is there a free plan?

Yes. Every plan includes the agent, including free, and building from your own AI client spends no assistant credits.